An Efficient Algorithm for Identifying Mutated Subnetworks Associated with Survival in Cancer.
Aisharjya SarkarYilmaz AtayAlana Lorraine EricksonIvan ArisiCesare SaltiniTamer KahveciPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2020)
Keyphrases
- learning algorithm
- computational cost
- experimental evaluation
- cost function
- times faster
- dynamic programming
- high accuracy
- optimal solution
- k means
- probabilistic model
- similarity measure
- simulated annealing
- expectation maximization
- highly efficient
- memory efficient
- neural network
- matching algorithm
- clustering method
- optimization algorithm
- theoretical analysis
- linear programming
- objective function
- segmentation algorithm
- detection algorithm
- computationally efficient
- ant colony optimization
- preprocessing
- recognition algorithm
- improved algorithm
- computational complexity