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Parallel tiled Nussinov RNA folding loop nest generated using both dependence graph transitive closure and loop skewing.
Marek Palkowski
Wlodzimierz Bielecki
Published in:
BMC Bioinform. (2017)
Keyphrases
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transitive closure
directed acyclic graph
expressive power
constraint databases
query evaluation
rna secondary structure prediction
recursive queries
random walk
database applications
graph theoretic
database systems
natural language
query language
database design
relational algebra