RepFrag: a graph based method for finding repeats and transposons from fragmented genomes.

Nirmalya Bandyopadhyay A. Mark Settles Tamer Kahveci

Published in: BCB (2010)

Keyphrases

method finds
computational cost
high accuracy
experimental evaluation
detection method
computational complexity
clustering method
high precision
cost function
similarity measure
denoising
neural network
computationally efficient
segmentation method
fully automatic
optimization method
feature extraction