Algorithm of OMA for large-scale orthology inference.
Alexander C. J. RothGaston H. GonnetChristophe DessimozPublished in: BMC Bioinform. (2009)
Keyphrases
- detection algorithm
- estimation algorithm
- computational cost
- learning algorithm
- optimization algorithm
- np hard
- k means
- matching algorithm
- times faster
- optimal solution
- dynamic programming
- experimental evaluation
- energy function
- theoretical analysis
- selection algorithm
- neural network
- inference process
- particle swarm optimization
- probabilistic model
- search space
- computational complexity
- bayesian networks
- expectation maximization
- linear programming
- simulated annealing
- classification algorithm
- probabilistic inference
- similarity measure
- clustering algorithm