Optimizing scoring function of dynamic programming of pairwise profile alignment using derivative free neural network.
Kazunori D. YamadaPublished in: CoRR (2017)
Keyphrases
- scoring function
- derivative free
- pairwise
- sequence alignment
- neural learning
- neural network
- dynamic programming
- log likelihood
- multi layered
- unconstrained optimization
- structure learning
- scoring functions
- gradient method
- semi supervised
- artificial neural networks
- markov random field
- trust region
- bayesian networks
- ranking functions
- back propagation
- incremental learning
- similarity measure
- genetic algorithm
- higher order
- image reconstruction
- optimal solution
- training data
- feature selection