emPDBA: protein-DNA binding affinity prediction by combining features from binding partners and interface learned with ensemble regression model.
Shuang YangWeikang GongTong ZhouXiaohan SunLei ChenWenxue ZhouChunhua LiPublished in: Briefings Bioinform. (2023)
Keyphrases
- dna binding
- regression model
- prediction model
- linear regression model
- prediction intervals
- genome wide
- binding sites
- highly similar
- transcription factors
- multiple linear regression
- multivariate regression
- explanatory variables
- protein interaction
- regression analysis
- model selection
- protein structure prediction
- transcription factor binding sites
- gaussian process
- co occurrence
- component analysis
- protein families
- gene expression
- pairwise
- feature space