Towards a practical O(n log n) phylogeny algorithm.
Jakub TruszkowskiYanqi HaoDaniel G. BrownPublished in: Algorithms Mol. Biol. (2012)
Keyphrases
- worst case
- optimization algorithm
- objective function
- computationally efficient
- times faster
- computational complexity
- preprocessing
- cost function
- experimental study
- high accuracy
- experimental evaluation
- np hard
- selection algorithm
- dynamic programming
- evolutionary algorithm
- probabilistic model
- convergence rate
- optimal solution
- learning algorithm
- single pass
- estimation algorithm
- data sets
- computationally demanding
- clustering method
- detection algorithm
- simulated annealing
- upper bound
- significant improvement
- lower bound
- genetic algorithm
- neural network