trieFinder: an efficient program for annotating digital gene expression (DGE) tags.
Gabriel RenaudMatthew C. LaFaveJin LiangTyra G. WolfsbergShawn M. BurgessPublished in: BMC Bioinform. (2014)
Keyphrases
- gene expression
- microarray
- gene expression data
- metadata
- microarray data
- gene expression data analysis
- gene regulation
- biological processes
- gene expression profiles
- gene expression patterns
- differentially expressed genes
- gene expression analysis
- binding sites
- functional genomics
- gene interactions
- drosophila melanogaster
- dna microarray
- protein interaction
- microarray data analysis
- regulatory elements
- regulatory networks
- gene expression data sets
- biological networks
- colon cancer
- analysis of gene expression
- genomic data
- gene selection
- high dimensional data