Cluster-Buster: finding dense clusters of motifs in DNA sequences.
Martin C. FrithMichael C. LiZhiping WengPublished in: Nucleic Acids Res. (2003)
Keyphrases
- dna sequences
- clustering algorithm
- tandem repeats
- hierarchical clustering
- dense regions
- overlapping clusters
- motif discovery
- inter cluster
- arbitrary shape
- cluster analysis
- data clustering
- binding sites
- dna sequencing
- biological sequences
- data points
- human genome
- subspace clustering
- intra cluster
- disjoint clusters
- clustering quality
- dna computing
- nucleotide sequences
- genomic sequences
- sequence patterns
- coding regions
- densely connected
- transcription factors
- rna sequences
- cluster centers
- k means
- self organizing maps
- gene structure prediction
- transcription factor binding sites
- biological databases
- clustering method
- data analysis