A New Hardware Architecture for Genomic and Proteomic Sequence Alignment.
Greg KnowlesPaul Gardner-StephenPublished in: CSB (2004)
Keyphrases
- hardware architecture
- sequence alignment
- proteomic data
- high throughput
- comparative genomics
- pairwise
- hardware implementation
- dynamic programming
- binding sites
- hardware architectures
- field programmable gate array
- microarray
- genome wide
- genomic data
- amino acids
- sequence data
- protein sequences
- associative memory
- mass spectrometry
- multiple sequence alignment
- protein protein interactions
- multiple alignment
- biological data
- computer vision
- xilinx virtex
- phylogenetic analysis
- protein structure
- block matching motion estimation
- human genome
- parallel computing
- reinforcement learning