A motif-independent metric for DNA sequence specificity.
Luca PinelloGiosuè Lo BoscoBret M. HanlonGuo-Cheng YuanPublished in: BMC Bioinform. (2011)
Keyphrases
- dna sequences
- motif discovery
- tandem repeats
- human genome
- dna sequencing
- binding sites
- transcription factors
- biological sequences
- nucleotide sequences
- dna computing
- coding regions
- problems in computational biology
- regulatory elements
- sequence patterns
- transcription factor binding sites
- gene prediction
- evaluation metrics
- distance function
- gene structure prediction
- data mining
- genomic sequences
- knowledge discovery