Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks.
Nikolai DaraseliaAnton YuryevSergei EgorovIlya MazoIaroslav IspolatovPublished in: BMC Bioinform. (2007)
Keyphrases
- automatic extraction
- gene ontology
- gene products
- gene clusters
- protein protein interactions
- interaction networks
- protein function
- signaling pathways
- gene function
- biological networks
- protein interaction
- biomedical literature
- microarray
- protein interaction data
- gene expression
- protein interaction networks
- gene networks
- network analysis
- protein protein interaction networks
- semantic similarity
- functional modules
- information theoretic
- protein complexes
- ppi networks
- systems biology
- complex networks
- network structure
- computational methods
- gene expression analysis
- gene sets
- microarray expression data
- biological data
- high throughput
- social networks
- gene regulatory networks
- network topology
- protein sequences
- text mining
- mass spectrometry
- structural properties
- amino acids
- highly correlated
- gene expression data
- cluster analysis
- saccharomyces cerevisiae
- information extraction
- natural language
- biological processes