pfsearchV3: a code acceleration and heuristic to search PROSITE profiles.
Thierry SchüpbachMarco PagniAlan BridgeLydie BougueleretIoannis XenariosLorenzo CeruttiPublished in: Bioinform. (2013)
Keyphrases
- search algorithm
- search strategies
- search space
- search strategy
- tree search
- forward search
- search methods
- search effort
- optimal solution
- beam search
- exhaustive search
- search procedure
- search problems
- simulated annealing
- heuristic function
- depth first search
- heuristic search algorithms
- iterative deepening
- objective function
- pattern databases
- tree search algorithm
- game tree search
- greedy search
- search procedures
- search efficiency
- search queries
- solution space
- tabu search