Transcription Factor Centric Discovery of Regulatory Elements in Mammalian Genomes Using Alignment-Independent Conservation Maps.
Nilanjana BanerjeeAndrea CalifanoPublished in: Comparative Genomics (2006)
Keyphrases
- regulatory elements
- transcription factors
- binding sites
- sequence data
- dna sequences
- gene expression
- biological processes
- motif discovery
- sequence alignment
- transcription factor binding sites
- microarray
- component analysis
- computational biology
- genome wide
- gene regulation
- genomic data
- knowledge discovery
- biomedical literature
- systems biology
- statistical significance
- biological sequences
- gene expression data
- co occurrence
- data mining
- highly correlated
- microarray data
- high throughput
- natural language processing
- pattern discovery
- genome sequences