Classifying protein sequences using hydropathy blocks.
De-Shuang HuangXing-Ming ZhaoGuang-Bin HuangYiu-ming CheungPublished in: Pattern Recognit. (2006)
Keyphrases
- protein sequences
- svm classifier
- computational biology
- amino acids
- protein structure
- biological sequences
- secondary structure
- protein classification
- amino acid sequences
- sequence analysis
- support vector machine
- multiple sequence alignment
- protein structure prediction
- protein structure and function
- support vector machine svm
- image classification
- protein function
- support vector
- amino acid composition
- multiple alignment
- feature extraction
- sequence alignment
- molecular biology
- string kernels
- high dimensional
- psi blast
- machine learning