A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities.
Olivier BastienPhilippe OrtetSylvaine RoyEric MaréchalPublished in: BMC Bioinform. (2005)
Keyphrases
- configuration space
- mutual information
- pairwise
- simple linear
- belief networks
- degrees of freedom
- information theoretic
- phylogenetic trees
- image registration
- path planning
- motion planning
- similarity measure
- mathematical formalism
- feature selection
- probability distribution
- protein structure
- multiple sequence alignment
- bayesian networks
- protein protein interactions
- protein sequences
- belief propagation
- articulated body
- first order logic
- computational biology
- joint space
- image processing
- spatio temporal
- sequence data
- evolutionary algorithm
- amino acids
- simulated annealing
- graphical models