A similarity matrix-based hybrid algorithm for the contact map overlaps problem.
Hengyun LuGenke YangLam Fat YeungPublished in: Comput. Biol. Medicine (2011)
Keyphrases
- hybrid algorithm
- similarity matrix
- contact map
- protein structure alignment
- protein structure
- pairwise
- co occurrence
- spectral clustering
- particle swarm optimization
- tabu search
- similarity measure
- simulated annealing
- clustering algorithm
- differential evolution
- ant colony optimization
- particle swarm optimization pso
- optimal solution
- standard test problems
- imperialist competitive algorithm
- genetic algorithm
- dimension reduction
- amino acids
- clustering method
- latent semantic indexing
- metaheuristic
- optimization method
- evolutionary algorithm
- nonlinear integer programming
- genetic algorithm ga
- optimization algorithm
- genetic programming
- multi objective
- face recognition
- neural network