Efficient computation of all perfect repeats in genomic sequences of up to half a gigabyte, with a case study on the human genome.
Verónica BecherAlejandro DeymonnazPablo Ariel HeiberPublished in: Bioinform. (2009)
Keyphrases
- efficient computation
- human genome
- dna sequences
- genomic sequences
- tandem repeats
- gene prediction
- computational efficiency
- gene expression time series
- human genome project
- binding sites
- transcription factors
- evolutionary history
- computational complexity
- previously unknown
- genome wide
- genotype phenotype
- skyline queries
- user preferences