Prediction of protein solvent accessibility using PSO-SVR with multiple sequence-derived features and weighted sliding window scheme.
Jian ZhangWenhan ChenPingping SunXiaowei ZhaoZhiqiang MaPublished in: BioData Min. (2015)
Keyphrases
- sliding window
- solvent accessibility
- secondary structure
- protein sequences
- data streams
- protein structure
- prediction accuracy
- amino acids
- feature vectors
- window size
- subcellular localization
- fixed size
- stream data
- support vector regression
- streaming data
- variable size
- protein structure prediction
- particle swarm optimization
- limited memory
- sequence analysis
- space efficient
- predicting protein
- closed frequent itemsets
- sequence alignment
- support vector