Adapting Protein Language Models for Explainable Fine-Grained Evolutionary Pattern Discovery.
Ashley BabjacOwen QueenShawn-Patrick BarhorstKambiz KalhorAndrew D. SteenScott J. EmrichPublished in: BIBM (2023)
Keyphrases
- language model
- pattern discovery
- fine grained
- coarse grained
- language modeling
- protein sequences
- pattern mining
- n gram
- probabilistic model
- document retrieval
- data analysis
- association rule mining
- sequential patterns
- information retrieval
- protein structure
- multiple sequence alignment
- amino acids
- access control
- retrieval model
- query expansion
- test collection
- query terms
- data mining
- sequence alignment
- vector space model
- document ranking
- frequent patterns
- cross lingual
- smoothing methods
- language models for information retrieval