Transcriptional Hubs Within Cliques in Ensemble Hi-C Chromatin Interaction Networks.
Gatis MelkusAndrejs SizovsPeteris RucevskisSandra SilinaPublished in: J. Comput. Biol. (2024)
Keyphrases
- interaction networks
- systems biology
- biological processes
- gene regulation
- transcription factors
- gene regulatory networks
- high throughput
- functional modules
- biological networks
- gene expression
- regulatory networks
- biological data
- biological systems
- microarray
- protein interaction networks
- gene expression data
- protein protein interactions
- reverse engineering
- molecular biology
- binding sites
- component analysis
- computational biology
- neural network
- genome wide
- genomic data
- network model
- protein function
- protein protein interaction networks
- protein interaction
- microarray data
- dna sequences
- graph mining
- protein complexes
- biological knowledge
- text mining
- mass spectrometry
- data acquisition
- experimental conditions
- biomedical literature
- structure learning