SLR: a scaffolding algorithm based on long reads and contig classification.
Junwei LuoMengna LyuRanran ChenXiaohong ZhangHuimin LuoChaokun YanPublished in: BMC Bioinform. (2019)
Keyphrases
- classification algorithm
- detection algorithm
- experimental evaluation
- preprocessing
- learning algorithm
- classification method
- computational cost
- optimization algorithm
- significant improvement
- pattern recognition
- times faster
- classification scheme
- cost function
- neural network
- dynamic programming
- optimal solution
- classification rule mining
- matching algorithm
- support vector machine svm
- semi supervised
- selection algorithm
- training phase
- feature vectors
- recognition algorithm
- decision trees
- multi class classification
- text classification
- image segmentation
- class labels
- clustering method
- feature extraction
- objective function
- training set
- knn
- classification accuracy
- np hard
- prior knowledge
- k means
- search space
- high dimensional