GROOLS: reactive graph reasoning for genome annotation through biological processes.
Jonathan MercierAdrien JossoClaudine MédigueDavid VallenetPublished in: BMC Bioinform. (2018)
Keyphrases
- biological processes
- gene expression
- protein protein interactions
- protein interaction
- biological data
- biological systems
- microarray
- computational biology
- molecular biology
- systems biology
- functional modules
- biomedical literature
- graph theory
- cell cycle
- biological networks
- connected components
- protein interaction networks
- regulatory networks
- gene regulatory networks
- high throughput
- interaction networks
- text mining
- random walk
- experimental conditions
- graph mining
- protein complexes
- similarity measure
- genome annotation