A Volumetric Survey of Cavities and Electrostatic Patterns in Protein-RNA Binding Sites.
Devan BicherBrian Y. ChenPublished in: BCB (2019)
Keyphrases
- binding sites
- transcription factor binding sites
- dna binding
- genome wide
- cis regulatory
- protein protein
- dna sequences
- sequence alignment
- genome sequences
- sequence data
- regulatory elements
- transcription factors
- drosophila melanogaster
- motif discovery
- genomic sequences
- protein interaction
- high throughput
- protein families
- gene expression
- sequence analysis
- pattern discovery
- gene regulation
- biological sequences
- regulatory networks
- computational methods
- protein sequences
- sequence databases
- saccharomyces cerevisiae
- influenza virus
- machine learning
- protein protein interaction networks
- protein complexes
- protein protein interactions
- computational biology
- microarray
- protein function
- previously unknown
- secondary structure
- pattern mining
- data mining techniques