A New Approach to Pattern Matching in Degenerate DNA/RNA Sequences and Distributed Pattern Matching.
Costas S. IliopoulosLaurent MouchardMohammad Sohel RahmanPublished in: Math. Comput. Sci. (2008)
Keyphrases
- pattern matching
- rna sequences
- pattern matching algorithm
- secondary structure
- dna sequences
- regular expressions
- rna secondary structures
- matching process
- boyer moore
- free energy
- distributed systems
- bit parallel
- protein sequences
- bayesian framework
- high throughput
- pairwise
- coding regions
- rna secondary structure prediction
- approximate pattern matching
- similarity measure