Counter based suffix tree for DNA pattern repeats.
Tshepo Kitso GobonamangDimane MpoelengPublished in: Theor. Comput. Sci. (2020)
Keyphrases
- suffix tree
- sequence analysis
- pattern matching
- suffix array
- data structure
- string matching
- periodic patterns
- space requirements
- tree construction
- sequence data
- periodicity detection
- disk resident
- indexing structure
- index structure
- computational biology
- dna sequences
- pattern discovery
- information retrieval
- neural network