A non-independent energy-based multiple sequence alignment improves prediction of transcription factor binding sites.
Rafik Amir SalamaDov J. StekelPublished in: Bioinform. (2013)
Keyphrases
- multiple sequence alignment
- transcription factor binding sites
- biological sequences
- binding sites
- computational biology
- dna sequences
- memory efficient
- transcription factors
- protein sequences
- motif discovery
- sequence alignment
- secondary structure
- genetic algorithm
- gene expression
- databases
- sequence data
- microarray
- data integration