Space-Conserving Optimal DNA-Protein Alignment .

Pang Ko Mahesh Narayanan Anantharaman Kalyanaraman Srinivas Aluru

Published in: CSB (2004)

Keyphrases

sequence alignment
sequence analysis
protein structure
multiple sequence alignment
search space
dynamic programming
space time
optimal solution
worst case
dna sequences
protein sequences
dna computing
smith waterman
remote homology detection
nucleotide sequences
dna binding
binding sites
pairwise
feature space