SPIN-CGNN: Improved fixed backbone protein design with contact map-based graph construction and contact graph neural network.
Xing ZhangHongmei YinFei LingJian ZhanYaoqi ZhouPublished in: PLoS Comput. Biol. (2023)
Keyphrases
- graph construction
- contact map
- neural network
- knn
- k nearest neighbor
- graph based semi supervised learning
- semi supervised
- protein structure
- protein structure alignment
- nearest neighbor
- neighborhood graph
- label propagation
- random walk
- semi supervised learning
- maximum clique
- directed graph
- semi supervised classification
- pattern recognition
- learning algorithm