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CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching.

Torbjørn RognesLonneke SchefferVictor GreiffGeir Kjetil Sandve
Published in: Bioinform. (2022)
Keyphrases
  • exact and approximate
  • sequence matching
  • duplicate detection
  • lower bound
  • subsequence matching
  • string matching
  • dynamic time warping
  • search algorithm
  • suffix tree
  • time stamped
  • data sets
  • dynamic programming