DNA sequence and structure: direct and indirect recognition in protein-DNA binding.
Nicholas R. SteffenS. D. MurphyL. TolleriG. Wesley HatfieldRichard H. LathropPublished in: ISMB (2002)
Keyphrases
- dna binding
- dna sequences
- binding sites
- transcription factors
- transcription factor binding sites
- motif discovery
- protein families
- genomic sequences
- genome wide
- gene expression
- regulatory elements
- protein sequences
- sequence alignment
- protein structure
- sequence similarity
- protein coding regions
- component analysis
- co occurrence
- computational biology
- microarray
- biological processes
- protein interaction
- statistical significance