ListMotif: A time and memory efficient algorithm for weak motif discovery.

He Quan Sun Malcolm Yoke Hean Low Wen-Jing Hsu Jagath C. Rajapakse

Published in: ISKE (2010)

Keyphrases

memory efficient
motif discovery
dynamic programming
preprocessing
optimization algorithm
dna sequences
similarity measure
optimal solution
objective function
high dimensional
complexity analysis
motif discovery algorithm