Dimensionality reduction in patch-signature based protein structure matching.
Zi HuangXiaofang ZhouDawei SongPeter BruzaPublished in: ADC (2006)
Keyphrases
- protein structure
- dimensionality reduction
- molecular biology
- protein sequences
- data representation
- secondary structure
- protein structure prediction
- protein tertiary structure
- high dimensional
- feature extraction
- matching algorithm
- principal component analysis
- high dimensional data
- low dimensional
- protein function
- pattern matching
- image patches
- high dimensionality
- amino acids
- data analysis
- contact map
- nuclear magnetic resonance
- experimentally determined
- protein structural
- graph matching
- coarse grained