STAR: an algorithm to Search for Tandem Approximate Repeats.
Olivier DelgrangeEric RivalsPublished in: Bioinform. (2004)
Keyphrases
- search space
- dynamic programming
- times faster
- experimental evaluation
- objective function
- search strategy
- preprocessing
- detection algorithm
- learning algorithm
- improved algorithm
- cost function
- search mechanism
- theoretical analysis
- high accuracy
- computational cost
- significant improvement
- optimization algorithm
- k means
- computational complexity
- search algorithm
- recognition algorithm
- piecewise linear
- search efficiency
- particle swarm optimization
- matching algorithm
- similarity measure
- string matching
- neural network