Optimizing Data Parallelism for FM-Based Short-Read Alignment on the Heterogeneous Non-Uniform Memory Access Architectures.
Shaolong ChenYunzi DaiLiwei LiuXinting YuPublished in: Future Internet (2024)
Keyphrases
- data parallelism
- memory access
- shared memory
- distributed memory
- parallel processing
- memory management
- parallel programming
- combinatorial search
- message passing
- data access
- parallel algorithm
- processing units
- main memory
- distributed computing
- parallel computing
- signal processing
- data storage
- external memory
- hardware implementation
- database
- markov random field
- data analysis
- data structure