Parallelized Pipeline for Whole Genome Shotgun Metagenomics with GHOSTZ-GPU and MEGAN.
Masahito OhueMarina YamasawaKazuki IzawaYutaka AkiyamaPublished in: BIBE (2019)
Keyphrases
- genomic sequences
- sequence data
- genome sequences
- real time
- dna sequences
- graphics hardware
- sequence analysis
- gpu implementation
- parallel architecture
- parallel implementation
- graphics processing units
- parallel computation
- processing pipeline
- parallel processing
- gpu accelerated
- graphics processors
- pipeline architecture
- databases
- parallel computing
- implicit surfaces
- social networks
- artificial intelligence
- cluster of workstations