FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods.
Stephanie ZierkeJason D. BakosPublished in: BMC Bioinform. (2010)
Keyphrases
- likelihood function
- posterior probability
- markov chain monte carlo
- posterior distribution
- maximum likelihood
- bayesian networks
- particle filter
- generative model
- proposal distribution
- bayesian framework
- probabilistic model
- em algorithm
- probability distribution
- hardware implementation
- conditional probabilities
- probability density function
- hyperparameters
- field programmable gate array
- gaussian process
- bayesian inference
- log likelihood function
- parameter estimation
- phylogenetic trees
- computer vision
- latent variables
- parameter space
- maximum a posteriori
- expectation maximization
- maximum likelihood estimates
- gaussian processes
- closed form
- missing values
- least squares
- support vector
- data mining
- metropolis hastings algorithm