Iterative sequence/secondary structure search for protein homologs: comparison with amino acid sequence alignments and application to fold recognition in genome databases.
Anders WallqvistYoshifumi FukunishiLynne Reed MurphyAddi FadelRonald M. LevyPublished in: Bioinform. (2000)
Keyphrases
- secondary structure
- psi blast
- amino acid sequences
- protein sequences
- multiple sequence alignment
- tertiary structure
- secondary structure of proteins
- sequence analysis
- protein structural
- remote homology detection
- amino acids
- sequence databases
- genome sequences
- protein structure
- sequence alignment
- predicting protein
- protein secondary structure
- sequence similarity
- rna sequences
- protein folding
- computational biology
- protein structure prediction
- computational methods
- sequence data
- solvent accessibility
- secondary structure prediction
- biological sequences
- protein secondary structure prediction
- protein classification
- protein function
- computational approaches
- molecular biology
- machine learning
- contact map
- experimentally determined
- statistically significant
- statistical analysis
- pairwise