Searching algorithm for Type IV effector proteins (S4TE) 2.0: Improved tools for Type IV effector prediction, analysis and comparison in proteobacteria.
Christophe NoroyThierry LefrançoisDamien F. MeyerPublished in: PLoS Comput. Biol. (2019)
Keyphrases
- objective function
- improved algorithm
- prediction algorithm
- detection algorithm
- preprocessing
- optimization algorithm
- significant improvement
- np hard
- prediction error
- statistical analysis
- optimal solution
- dynamic programming
- high accuracy
- search space
- experimental evaluation
- string matching
- times faster
- worst case
- matching algorithm
- particle swarm optimization
- genetic algorithm
- computational cost
- image segmentation
- feature selection