Community Detection-Based Feature Construction for Protein Sequence Classification.
Karthik TangiralaNic HerndonDoina CarageaPublished in: ISBRA (2015)
Keyphrases
- feature construction
- community detection
- sequence classification
- sequence alignment
- sequence data
- complex networks
- data representation
- hidden markov models
- network analysis
- social networks
- machine learning
- rule learning
- decision trees
- discriminative learning
- protein sequences
- community structure
- feature selection
- link prediction
- supervised learning
- conditional random fields
- pairwise
- amino acids
- protein structure
- dynamic programming
- knowledge discovery
- string kernels
- network structure