Qualitative Reasoning for Biological Network Inference from Systematic Perturbation Experiments.
Silvana BadaloniBarbara Di CamilloFrancesco SamboPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2012)
Keyphrases
- qualitative reasoning
- biological networks
- qualitative simulation
- genetic regulatory networks
- dynamic systems
- qualitative information
- qualitative models
- gene expression
- conceptual design
- biological data
- protein protein interaction networks
- complex networks
- biological systems
- graph mining
- inference process
- complex systems
- protein protein interactions
- artificial intelligence
- bayesian inference
- cooperative
- interaction networks
- connected subgraphs
- link prediction
- order of magnitude reasoning
- qualitative differential equations
- interesting patterns
- inference engine
- data mining
- qualitative and quantitative
- pattern mining
- dynamical systems
- data integration
- case study
- information retrieval