BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets.
Zhihao YangHongfei LinYanpeng LiPublished in: J. Biomed. Informatics (2010)
Keyphrases
- protein protein interactions
- feature set
- biomedical literature
- feature selection
- feature vectors
- support vector
- feature space
- biological processes
- computational methods
- high throughput
- classification accuracy
- protein interaction
- gene ontology
- high precision
- functional modules
- feature extraction
- network topology
- biological data
- knn
- structural properties
- biological networks
- protein interaction networks
- protein complexes
- data sets
- text mining
- network analysis
- training data
- semantic features
- microarray data
- statistical analysis
- protein protein interaction networks
- natural language