PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information.
Cornelia MeckbachRebecca TackeXu HuaStephan WaackEdgar WingenderMehmet GültasPublished in: BMC Bioinform. (2015)
Keyphrases
- pointwise mutual information
- transcription factors
- binding sites
- gene expression
- dna sequences
- genome wide
- microarray
- component analysis
- transcription factor binding sites
- dna binding
- regulatory networks
- gene regulation
- computational biology
- pairwise
- co occurrence
- gene expression data
- machine learning
- information extraction