SVM-dependent pairwise HMM: an application to protein pairwise alignments.
Gabriele OrlandoDaniele RaimondiTaushif KhanTom LenaertsWim F. VrankenPublished in: Bioinform. (2017)
Keyphrases
- pairwise
- sequence alignment
- multi class
- higher order
- conditional random fields
- hidden markov models
- semi supervised
- support vector
- graph matching
- markov random field
- loss function
- multiple sequence alignments
- pairwise interactions
- belief propagation
- support vector machine svm
- knn
- spectral clustering
- protein structure
- similarity measure
- kernel function
- similarity function
- gesture recognition
- amino acids
- speech signal
- feature space
- multiple sequence alignment
- learning algorithm