3D-Garden: a system for modelling protein-protein complexes based on conformational refinement of ensembles generated with the marching cubes algorithm.
Victor I. LeskMichael J. E. SternbergPublished in: Bioinform. (2008)
Keyphrases
- protein complexes
- protein protein interactions
- protein interaction data
- protein interaction networks
- experimentally determined
- protein interaction
- computational approaches
- protein protein interaction networks
- cellular processes
- protein functional
- protein function
- functional modules
- protein protein
- essential proteins
- genomic data
- computational biology
- protein folding
- predicting protein
- computational methods
- ppi networks
- biological processes
- high throughput
- saccharomyces cerevisiae
- data model
- network topology
- complex networks
- biological data
- structural properties
- protein structure
- machine learning methods
- gene expression