ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles.
Tiago C. SilvaSimon G. CoetzeeNicole GullLijing YaoDennis J. HazelettHoutan NoushmehrDe-Chen LinBenjamin P. BermanPublished in: Bioinform. (2019)
Keyphrases
- gene regulatory networks
- gene regulation
- gene expression data
- microarray technology
- gene regulatory
- gene expression
- reverse engineering
- network model
- systems biology
- microarray
- gene networks
- regulatory networks
- biological data
- genomic sequences
- dna sequences
- microarray data
- boolean networks
- binding sites
- rna seq
- dynamic bayesian networks
- structure learning
- high throughput
- bayesian inference
- cancer classification
- neural network
- transcription factor binding sites
- genomic data
- alternative splicing
- high dimensionality
- artificial intelligence