Discriminating transmembrane proteins from signal peptides using SVM-Fisher approach.
Li LiaoRobel Y. KahsayGuang R. GaoPublished in: ICMLA (2005)
Keyphrases
- amino acids
- mass spectrometry
- amino acid composition
- support vector machine svm
- protein sequences
- support vector
- amino acid residues
- physicochemical properties
- hiv protease
- knn
- signal processing
- feature selection
- support vector machine
- protein structure
- svm classifier
- multi class
- mass spectrometry data
- protein protein interactions
- secondary structure
- protein function
- protein structure prediction
- frequency domain
- kernel function
- linear support vector machines
- machine learning
- training set
- non stationary
- high throughput
- protein folding
- amino acid sequences
- maximum margin
- subcellular localization
- tandem mass spectra
- pattern recognition
- protein families
- neural network
- classification algorithm