Adaptive DNASegmentation: An Algorithm for Finding CpG Islands.
Sudeshna AdakPublished in: German Conference on Bioinformatics (2000)
Keyphrases
- detection algorithm
- times faster
- experimental evaluation
- preprocessing
- improved algorithm
- objective function
- learning algorithm
- k means
- np hard
- computational cost
- optimization algorithm
- simulated annealing
- segmentation algorithm
- probabilistic model
- theoretical analysis
- linear programming
- memory requirements
- convergence rate
- single pass
- selection algorithm
- matching algorithm
- tree structure
- shortest path
- computationally efficient
- input image
- dynamic programming
- search space
- search algorithm