Particle Swarm Optimisation for Protein Motif Discovery.
Bill C. H. ChangAsanga RatnaweeraSaman K. HalgamugeHarry C. WatsonPublished in: Genet. Program. Evolvable Mach. (2004)
Keyphrases
- particle swarm optimisation
- motif discovery
- protein sequences
- sequence databases
- biological sequences
- dna sequences
- computational biology
- optimization algorithm
- binding sites
- transcription factor binding sites
- pattern discovery
- optimisation problems
- sequence alignment
- data mining tasks
- protein structure
- multiobjective optimization
- amino acids
- pso algorithm
- similarity search
- sequence data
- global optimization
- fitness function
- data mining algorithms
- evolution strategy
- protein protein interactions
- multi objective
- biological networks
- genetic algorithm ga
- sequential pattern mining
- search capabilities
- evolutionary computation
- sequential patterns
- biological data
- database
- data mining
- databases
- molecular biology
- global search
- particle swarm optimization
- genetic programming
- particle swarm optimization pso
- evolutionary algorithm