A Sparsified Four-Russian Algorithm for RNA Folding.
Yelena FridDan GusfieldPublished in: WABI (2015)
Keyphrases
- detection algorithm
- dynamic programming
- theoretical analysis
- improved algorithm
- optimization algorithm
- np hard
- probabilistic model
- cost function
- k means
- preprocessing
- convergence rate
- rna secondary structure prediction
- experimental evaluation
- computational cost
- times faster
- optimal solution
- learning algorithm
- simulated annealing
- recognition algorithm
- computationally efficient
- computational complexity
- similarity measure
- particle swarm optimization
- segmentation algorithm
- linear programming
- high accuracy
- tree structure
- classification algorithm
- worst case
- objective function
- secondary structure
- rna secondary structures
- decision trees